GWAS Annotated Elements: USP47

Gene: ubiquitin specific peptidase 47

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH11J011415 - 11:11417006:C:G 0.5984 Enhancer Elite eQTLs chr11:11415633-11417163
EP300IKZF2IKZF1EEDRUNX3GABPASPI1FOSL2STAT3JUNDMYCCEBPBFOS
GH11J011426 - 11:11427902:T:C 0.1243 Enhancer Elite eQTLs chr11:11426240-11428329
CTCFFOSNFICLCORLNFIB
GH11J011787 - 11:11787998:C:G 0.8674 Enhancer - eQTLs,C-HiC chr11:11787873-11788023
CTCFSMC3RAD21TRIM22EP300CTBP1GATA3RB1YY1ARID2RCOR1FOXA1ZNF592ZNF143FOXA2REST
GH11J011798 - 11:11799003:C:CCA 0.5532 Enhancer - C-HiC chr11:11798933-11799083
CTCFZNF263L3MBTL2RXRASMC3YY1SKILXRCC5RAD21CC2D1AHNF4AARNTTRIM22NCOA1SOX6MAXARID2MAFFMYCRLFZNF143RESTJUNDBHLHE40ZSCAN29IKZF1
GH11J011806 - None 0.0000 Enhancer - C-HiC chr11:11806753-11806903 -
GH11J011808 - 11:11809551:A:G 1.6599 Enhancer - eQTLs,C-HiC chr11:11808725-11809675
PKNOX1EP300
GH11J011811 - None 0.0000 Enhancer - C-HiC chr11:11811473-11811663
CTCFL3MBTL2RNF2GMEB1SMARCA4IKZF1ZNF592ZBTB40PMLHDAC1MGARBFOX2POLR2APHF8ZFXPHF20ELF4SIN3APOLR2GHNRNPLLGABPB1HCFC1TBPGABPADPF2KDM5BHES1NRF1SMAD5ELF1MYCZNF639MEIS2EGR1IRF1CBX3CC2D1APKNOX1SP1ZBTB2FOXK2MAXHDAC2KLF16TRIM24E2F6CHAMP1
GH11J011812 - 11:11815038:A:T 1.7386 Enhancer Elite eQTLs,C-HiC chr11:11812704-11815304
ASH2LRESTESRRAFOXA1SIN3ANCOR1TBX3MAXHNF4ATCF12SP1SKIRAD21YY1GABPANR2F2HNF4GCHD1ZBTB33FOXA2CREMXRCC5ATF3POLR2AEGR1HDAC2ARID3AJUNDETS1EP300MAFFMYCBHLHE40TAF1RXRAFOSNR3C1KDM1AMEIS2RCOR1NFE2L2ATF4CEBPBPKNOX1SMARCC2EHMT2POLR2GSTAT3FOSL2ZBTB7AIRF2SP1HNF4ADPF2RNF2HDAC1SMARCA4MGAE4F1YY1SMARCE1NFRKBMEIS2CBFA2T3CTBP1MYCNR2F6SOX6L3MBTL2THRAMTA1PKNOX1MAXNR2F2NCOA1LEF1EP300JUNDNR2F1ATF7ESRRAZBTB40ZNF592YY1
GH11J011840 - 11:11845996:T:A 1.3531 Promoter/Enhancer Elite eQTLs,Distance chr11:11840790-11846118
CBX2ZNF592ZNF830HDAC3ARID1BRBM25ARNTZNF316NFICRESTPOLR2ATBPTAF1HDAC1UBTFPOLR2GYY1RBFOX2IKZF1FOXM1PHF8SIN3AHNRNPLTAF15BCORNR2F2ZFXMYNNZBTB7AHDAC2CTCFBRD4TRIM28PHF20NBNRXRASTAT5AMTA3GABPB1KDM4AASH2LRAD21RNF2CC2D1ATRIM22NCOA6ZNF143CHAMP1ZNF830PRDM10MAXTCF12ZNF207SIX5ATF4EP400ZNF592MNTELF4TBPKDM5BGMEB1POU2F2NFRKBEZH2ATF7EP300E2F4ARID1BZNF24NCOR1GABPASMC3ZNF639TBL1XR1EGR1HNF4GZNF184MBD2SP1CUX1ATF2RBM22NFATC3RCOR1ZBTB33HNRNPLLNR3C1STAT1IRF1PKNOX1NFICZHX1TCF7KLF5SOX13TRIM24DPF2TAF9BGATAD2BFIP1L1ELF1ATF3ARHGAP35SMAD5ZNF687JUNDKDM5AFUSCREMRB1PRPF4XRCC5MEF2ACREB1CBX1MAFFHCFC1BRCA1RBM39HNRNPUL1U2AF1CBFBSKIPMLNRF1ETS1ESRRACHD1CEBPBRLFE2F6AGO1RFX5KDM4BKAT2BBCL3NANOGZHX2UBTFCTBP1CREB3L1L3MBTL2AGO2SKILRBBP5ZZZ3RBM25SRFBACH1MLLT1RUNX1LEF1MXI1ZNF316TAF15ZSCAN29SIN3BHNRNPKSREBF2PCBP2LCORLMEF2BDACH1ZBTB7AAFF1KDM5BZNF24SMARCA4GATAD2ANBNSMAD5E4F1SAP30ZBTB33FOXM1SMAD1RESTTCF12TAF1TRIM28PRDM10CTCFMYNNSTAT3MEIS2MAXTBPMAFKHNF4AMYCNRF1MAFFCUX1CEBPBRUNX3HMBOX1ZNF384IRF1CREMPOLR2ANFATC1MLLT1HDAC1TAL1FOXA2HDAC2TBPATF4KDM1ACTCFCREB1JUNBSMARCE1TEAD4MYCATF2DPF2SP1EP300HMBOX1RAD21NCOR1NCOA1ARID3AARID1BCEBPBTCF12JUNDFOSCBFA2T3GATA1SMARCA4PRDM10JUNSTAT3E2F1ATF3NFYBPMLPKNOX1GABPB1ZNF592EP300RCOR1TEAD4ARID1BZEB2HDAC3TAL1CBFA2T2DPF2CBFA2T3NR2C1MEIS2NCOR1MLLT1HDAC1ZNF24HES1MCM7ZBTB5HMBOX1ESRRANR2F6NR2F2NRF1RUNX3RBFOX2POLR2AHMBOX1ZNF217ARID1BCBFA2T3JUNDTCF12CTCFTAL1GATA3ARID3AC11orf30EGR1DPF2CTBP1SPI1SMARCE1JUNDSPI1AGO1
GH11J011849 - 11:11849926:A:C 0.6097 Enhancer Elite Distance chr11:11849001-11850243
CTCFKDM1ARFX5NBNGATA1ZNF592DPF2E2F8TRIM28CC2D1AZBTB2E4F1RXRADACH1ZNF444ARNTXRCC5TBX21SMC3ATF3CHAMP1ELF1HDAC1TRIM24ZNF143YY1ARID3AFOXK2TRIM22SOX6WRNIP1SMARCA5RAD21MYCATF2SMARCA4TEAD4KLF16CEBPBEP300TBL1XR1RB1ZEB2TCF12ZNF384JUNDMAFKSKILCREMHNF4AFOXA1FOXA2PRPF4RUNX3AFF1NCOA1ZNF184RESTTCF12MIER1
GH11J011850 - None 0.0000 Enhancer - Distance chr11:11850800-11851000
ARID1BL3MBTL2CBFA2T3
GH11J011856 - 11:11856783:C:T 1.2723 Enhancer Elite eQTLs,Distance chr11:11856515-11857054
IKZF1TBX21ELF1MTA2RUNX3
GH11J011857 - 11:11858671:G:A 0.3906 Enhancer Elite eQTLs,Distance chr11:11857427-11859071
TRIM28CHAMP1PKNOX1NFATC3ASH1LSP1ZNF184RBM25NR2F1CC2D1AMYBL2YY1ZBTB33FOXM1RAD21IRF1HNF4AIRF2ZNF316MAFK
GH11J011859 - 11:11859888:G:A 0.1090 Enhancer - eQTLs,Distance chr11:11859811-11859994
ZBTB33
GH11J011860 - None 0.0000 Enhancer Elite Distance chr11:11860093-11861083
ZBTB33CHAMP1SMARCC2DPF2NCOR1SMARCE1ARID1BHDAC1MTA2SMARCA4CBFA2T3TAL1SOX6EP400TCF7L2C11orf30RNF2FOSMEIS2MAFKFOXA1JUNDDACH1EP300NFE2ZNF830CEBPBATF3NCOA2ARID1BMLLT1
GH11J011865 - 11:11865070:C:A 0.6431 Enhancer - eQTLs,Distance chr11:11865013-11865143
PAX8EP300SPI1ARID3ASRFDPF2RELBIKZF2IKZF1
GH11J011871 - 11:11871670:G:A 0.3492 Enhancer - eQTLs,C-HiC,Distance chr11:11871533-11871683
ZNF384SMARCA4KDM1AHDAC1
GH11J011872 - 11:11872474:C:T 0.9213 Enhancer - eQTLs,C-HiC,Distance chr11:11871754-11872503
ZNF384SMARCA4KDM1AHDAC1HDAC2
GH11J011878 - 11:11878271:G:A 2.0526 Enhancer - C-HiC,Distance chr11:11878007-11878341
ZNF316NFE2TAF9B
GH11J011884 - 11:11884503:G:C 1.3905 Enhancer - C-HiC,Distance chr11:11884453-11884603 -
GH11J011908 - 11:11909751:C:T 0.9886 Enhancer - eQTLs,C-HiC,Distance chr11:11908939-11910947
RCOR1EP300SMARCA4
GH11J011916 - 11:11916864:T:C 1.2436 Enhancer - eQTLs,Distance chr11:11916542-11917703
EP300BHLHE40MAFKJUNDSTAT3CTCF
GH11J011946 - 11:11946955:G:T 0.5891 Enhancer - eQTLs,Distance chr11:11946789-11947224 -
GH11J011948 - 11:11948682:T:C 0.0692 Enhancer - eQTLs,Distance chr11:11948643-11949058
MAFKMAXNCOR1ARID3AZBTB33HNF4AGABPARESTYY1POLR2AATF3TBL1XR1FOXA1SP1NR2F2JUNDRAD21HNF4GMAFFFOXA2RXRACEBPBSKI
GH11J011959 - 11:11962338:C:T 0.9465 Enhancer - eQTLs chr11:11959520-11962685
POLR2ARBM22FOSL2MITFUSF1USF2ZNF316NFE2
GH11J011963 - 11:11965380:A:G 0.8955 Enhancer - eQTLs chr11:11963040-11966118
BRD9FOXA1YY1MAXFOXA2EGR1ZBTB33TAF1SP1ATF3JUNDHNF4ARXRAHNF4GPOLR2APOLR2GMEIS2RBM25
GH11J011968 - 11:11968851:G:A 0.7580 Enhancer Elite eQTLs chr11:11968110-11969861
SIN3ACTCFSMARCA4RESTRAD21RCOR1CTCF
GH11J011970 - 11:11970618:C:T 0.3452 Enhancer - eQTLs chr11:11970437-11970870
HNF4A
GH11J011971 - 11:11971458:C:T 0.6762 Enhancer - eQTLs chr11:11971205-11971771
RNF2EP300
GH11J011972 - 11:11982821:T:C 1.1091 Enhancer Elite eQTLs chr11:11972542-11984168
ESR1TCF7L2RESTHNF4APOLR2ANR2F2YY1SP1RXRAEP300JUNDRAD21ATF3GATA1STAT3POLR2ARBM25ZMYM3CTCFRAD21RXRAMAXHNF4AHNF4GNR2F2SP1SP1ETS1TAF1TCF12PKNOX1JUNDFOSL2EP300POLR2ARESTRAD21ESR1FOSSIN3ANR3C1TBPSPI1ZMYM3POLR2AL3MBTL2SMARCA4NR2C1RCOR1RAD51RESTUSF2CTCFUSF1GABPB1GATA2IKZF1FOSSMC3RCOR1YY1RFX5RAD21CEBPBSIN3ANR3C1SMC3HNF4AGATA2POLR2AFOSYY1FOSFOXA1JUNDEP300