GWAS Annotated Elements: VIT

Gene: vitrin

Significance Threshold: -log10(P) ≥ 6.0

GHID GWAS Hit Lead SNP -log10P Type Elite Association Location TFBSs
GH02J036481 - 2:36482647:A:G 0.6320 Enhancer Elite eRNA_co-expression chr2:36481847-36493684
RBM22BCL3KDM1ASKITBX3TCF12SP1FOXA2EP300FOXA1ARID3ARFX1RXRASMC3CEBPBPOLR2ABHLHE40FOXA1EP300NR3C1RBM22POLR2AGATA3MAFKMAFFRESTPOLR2AJUNDSP1RAD21FOSNR2F2SIN3AGATA2MAFFNR3C1EP300FOSL2USF2USF1FOXA1BHLHE40RXRACTCFTCF12CEBPBASH2LTFAP4SIN3AKDM1APOLR2AGATA2SP1TBX3RAD21JUNDTAF1GABPASKITCF7L2ATF3DPF2RESTMAXRXRABCL3FOSZNF217CTBP1ARID3AGATA3NR2F2ELF1MLLT1GATA4CREMNR2F6MAFFSMARCC2FOXA2TCF7FOXA1TCF12TBPESR1EP300MAFKSMARCE1ETS1ZNF384FOSL2LCORLCEBPBCEBPBPOLR2AFOSFOSL2JUNDSIN3APOLR2ANR2F2ZBTB33USF1GATA3JUNDEP300RESTMEIS2NR2F2ESR1EP300SMARCA4
GH02J036657 - 2:36658613:C:G 0.8374 Enhancer - eQTLs,Distance chr2:36657690-36660904
RXRATCF7L2CREMDPF2ARID3AETS1GATA3KDM1AEP300HDAC2GATA4NR2F6TCF7CEBPBSREBF1HNRNPKKDM1ASKIHNF4AETS1SP1HDAC2CUX1TBX3CREMTFAP4ATF7ESRRATCF7EHMT2ATF2FOXA2FOXK2CEBPBARID3ACREB1HNF4GFOXP1FOSEP300RXRAMAFKASH2LMAFFZNF384JUNDSMARCC2FOXA1NFE2L2FOSL2BATFNCOR1JUNBNR2F6MEF2ASMARCE1MEF2CNFICRUNX3CHD4HNRNPKFOXA1KDM1A
GH02J036663 - 2:36664782:A:C 0.6506 Enhancer Elite Distance chr2:36663907-36664847
CTCFGATA2EZH2BCL3YY1ATF3RESTRAD21TRIM22FOXK2RCOR1FOXA1SMC3RB1ARID3AMAFFL3MBTL2FOXA2ZNF143E2F8
GH02J036678 - 2:36678006:G:C 0.3052 Enhancer - Distance chr2:36678000-36678201
SPI1ESR1
GH02J036695 - 2:36697750:C:T 1.1769 Promoter/Enhancer Elite Distance chr2:36695763-36698200
CTCFEP300PKNOX1RAD21GATA2CREB1GATA3JUNDFOSSTAT3CEBPBEP300FOXA2GATA2FOXA1TCF7L2EP300CEBPB
GH02J036699 - 2:36699228:C:T 0.7290 Enhancer Elite Distance chr2:36698999-36699296
SPI1EP300FOSCEBPBREST
GH02J036700 - 2:36700857:G:A 1.2582 Enhancer - Distance chr2:36700853-36702520
GATA2FOSJUNDPKNOX1ELF1GATA3CTBP1ZNF217RCOR1CREB1NEUROD1CTCFZNF24TRIM22FOXA1MNTRFX1SMARCE1ESR1MYCPKNOX1ZNF592
GH02J036704 - 2:36705055:C:T 0.1741 Enhancer - Distance chr2:36704937-36705087
POLR2AEP300
GH02J036705 - 2:36705900:G:A 0.2020 Enhancer Elite Distance chr2:36705825-36706601
CTCFZNF574SPI1EP300EBF1EP300SMARCA4
GH02J036706 - 2:36708948:G:C 1.3068 Enhancer Elite Distance chr2:36706732-36708954
EP300SMARCA4FOSEP300HDAC1CBFA2T2GABPABHLHE40CBFA2T3JUNDKDM1ARESTCTCFEP300PKNOX1
GH02J036731 - 2:36731686:A:T 0.0496 Enhancer - Distance chr2:36731488-36732254
RFX1BMI1GATA3DPF2
GH02J036737 - None 0.0000 Enhancer - Distance chr2:36737197-36737447 -
GH02J036753 - 2:36753555:A:C 0.5964 Enhancer - eQTLs,Distance chr2:36753296-36754828
POLR2AHDAC2TCF12EP300SP1NANOGFOSJUNDCREMSP1NR2F6TCF7EP300RXRAHNF4GHNF4AFOXA1FOXA2YY1
GH02J036780 - None 0.0000 Enhancer Elite Distance chr2:36780000-36780632
CTCFIRF2IRF1ZNF143ZNF384RAD21TRIM22RB1RESTSMC3HNRNPK
GH02J036781 - 2:36783414:G:T 1.0939 Enhancer Elite Distance chr2:36781921-36783655
SPI1GABPB1ZBTB7APKNOX1RFX1BMI1
GH02J036785 - None 0.0000 Enhancer - Distance chr2:36785297-36785467
CTCFXRCC5RAD21ZNF143RCOR1TRIM22RB1YY1ZNF444SMC3TEAD4MAXRESTKLF16BMI1FOSL2CREMZNF384ATF3JUNDSMARCA5USF2USF1
GH02J036800 - 2:36800503:A:C 1.6677 Enhancer - Distance chr2:36800241-36801711
L3MBTL2EGR1NRF1CREME2F6MTA2ZNF217RUNX3IRF4EBF1BATF